CDS

Accession Number TCMCG017C25080
gbkey CDS
Protein Id OMO72649.1
Location join(95515..95779,95912..96036,96364..96481,97313..97353,97432..97682,97783..97963,98476..98661,98804..98977,99077..99229,99839..99916,99997..100133,100313..100531,100661..100823)
GeneID InterPro:IPR000330
Organism Corchorus olitorius
locus_tag COLO4_27533

Protein

Length 696aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019628.1
Definition SNF2-related protein [Corchorus olitorius]
Locus_tag COLO4_27533

EGGNOG-MAPPER Annotation

COG_category B
Description SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD H box
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14439        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04550        [VIEW IN KEGG]
map04550        [VIEW IN KEGG]
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000729        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010225        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034644        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043044        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051260        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070932        [VIEW IN EMBL-EBI]
GO:0070933        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071494        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGCGCGTTTTCGATGAAATCTCTGATGAAGAATGGGAGAACCATACATTCAAGCCTTCTCGTGTTCTAAAGAAAAACCCTAACCCTCCTGCAATTGAGTCTTTCGCTTTCAATTCCCGTACGCCGCCGGCTGATTTCTCCGACCAGAGCAGCGACGATTGTGTTGAAATCGAACAATTGGAGGATGACGACTCCGACGGCGATTTTAAGTTGGAAGACGATGACGTTCTGCCCGAGGAGGCTGCTCCGGTTAATCGTGCCCGGAAAGCGTTGCAGAAGTGCGCGAAAATATCGGCGGAGCTTCGGAAGGAGCTGTACGGGAGTTCCGGTGCGTCTTGTGAACGATACTCCGAAGTTGAAACTTCTTCTGTGAGAATCGTTACGCAGAATGATATTGATGAGGCATGTGGGGCAGAGGAATCAGATTTTCAGCCGGTTCTCAAGCCGTACCAGCTGGTTGGTGTAAACTTTCTTCTTCTGTTGCATCGTAAGGGTATTGGAGGAGCCATATTGGCAGATGAGATGGGTCTTGGAAAAACCATTCAGGCTATTACTTATCTAACTTTGCTGAAACATCTAAAAAATGATCCTGGTCCCCATTTAATAGTTTGTCCTGCCTCACTTTTGGAAAACTGGGAAAGAGAACTTAAGAAGTGGTGCCCATCATTTTCGGTACTTCAGTATCATGGTGCTGCCCGGGCAGCTTACTCAAAGGAATTGAGCTATTTGTCCAAAGCTGGATTACCTCCACCATTTAATGTTATCCTTGTGTGTTATTCACTTTTTGAAAGACACAGTATGCAGCAGAAGGATGATCGTAAAATTCTGAAACGTTGGCGTTGGAGCTGTGTGCTAATGGATGAGGCCCATGCTTTGAAGGATAAGAACAGCTATAGGTGGAAAAATTTAATGTCAGTTGCTCGAAATGCAAACCAGCGTCTTATGCTAACAGGCACACCACTGCAAAATGATTTACATGAGCTGTGGTCCTTGTTAGAGTTCATGATGCCTGATCTTTTTGCCACCGAGGACGTGGACTTGAAGAAGCTTTTAAATGCAGAAGATAGGGAGTTGATTGGACGGATGAAGTCCATGTTGGGACCATTCATCTTGAGGCGTTTGAAATCAGATGTGATGCAGCAGCTTGCCCCAAAGATTCAACGGGTTGAGTATGTAACTATGGAAAAGAAACAAGACGATGCTTATAAGGAAGCCATAGAGGAGTATCGTACATTTTCAAGAGCACGCATTGCTAAGCTTTCGGAGTCCGACTTGAATAATGTCGTTGGGATTCTTCCTAAGCGTCAGATCTCAAACTATTTTATTCAGTTTCGCAAGATTGCAAATCATCCATTATTAGTGAGGCGAATTTATAATGATGAAGATGTTGTTCGCTTTGCTAAAAGGTTACATTCAATGGGTGTTTACCAATGTACCTTGGACAGAGTAATTAAGGAACTAAAGACTTACAATGACTTCTCTGTTCATCGGCTTTTACTTCGTTATGGGATTACTGGTGGTAAAGGAACTCTTTCTGATGAACACGTTATGCTTTCAGCTAAATGCCAGGCATTAGCAGAGCTTCTCCCTTCACTGAAGAAAAGTGGGCATCGGGTCCTAATTTTTAGCCAGTGGACATCGATGCTTGATATCTTAGAGTGGACTTTAGATGTGATTGGGGTTACATATAGACGGCTTGACGGAAGTACTCAGGTGACTGATAGGCAGACTATAGTAGATGACTTCAACAACGACACTTCTATATTTGCATGCTTGTTGTCCACTAGAGCTGGAGGACAGGGTTTGAACTTGACTGGAGCTGATACTGTAGTTATTCATGATATGGATTTTAATCCGCAGATTGATAGACAGGCTGAAGATCGCTGCCATCGAATTGGCCAAACAAAGCCTGTTACCATATACAGGCTGGTTACTAAAGGTACAGTTGATGAGACTGTTTATGAGATTGCAAAAAGGAAGTTGACTCTGGATGCTGCTGTGCTAGAGTCTGGAATGGATGTAGATAAGGAAGGTGAAATGGCCGAGAAGACAATGGGACAGATACTGTCATCCCTACTGATGAGCTAG
Protein:  
MKRVFDEISDEEWENHTFKPSRVLKKNPNPPAIESFAFNSRTPPADFSDQSSDDCVEIEQLEDDDSDGDFKLEDDDVLPEEAAPVNRARKALQKCAKISAELRKELYGSSGASCERYSEVETSSVRIVTQNDIDEACGAEESDFQPVLKPYQLVGVNFLLLLHRKGIGGAILADEMGLGKTIQAITYLTLLKHLKNDPGPHLIVCPASLLENWERELKKWCPSFSVLQYHGAARAAYSKELSYLSKAGLPPPFNVILVCYSLFERHSMQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNAEDRELIGRMKSMLGPFILRRLKSDVMQQLAPKIQRVEYVTMEKKQDDAYKEAIEEYRTFSRARIAKLSESDLNNVVGILPKRQISNYFIQFRKIANHPLLVRRIYNDEDVVRFAKRLHSMGVYQCTLDRVIKELKTYNDFSVHRLLLRYGITGGKGTLSDEHVMLSAKCQALAELLPSLKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDDFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDETVYEIAKRKLTLDAAVLESGMDVDKEGEMAEKTMGQILSSLLMS